The detailed information of tRNA gene sequence


Sequence ID>WENV170693929
Genome IDLGVD01000731
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 57193
End posion on genome 57106
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccttatac
tRNA gene sequence 
GGAGATATGACAGAGAGGTAATGTAGCGGTTTGCTAAACCGTCGTCGAGGTAACACTCGC
CTGGGTTCGATTCCCAGTATCTCCGCCA
Downstream region at tRNA end position 
ataagttaag
Secondary structure (Cloverleaf model)
>WENV170693929	Ser	GCT
                   c      GCCA ataagttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G A C C C     A
        G A        G      | | | | |     G
      A     G A C A       C T G G G     C
      G       | | |                 T T
      G     A T G T
        T A        A     CGTCGAGGTAACACTCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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