The detailed information of tRNA gene sequence


Sequence ID>WENV170693954
Genome IDLGVD01001384
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 117
End posion on genome 209
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggccttgcga
tRNA gene sequence 
GGAGAGGTTGCCGAGTGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTGAATAACG
GGATCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaatca
Secondary structure (Cloverleaf model)
>WENV170693954	Ser	CGA
                   a      GCCA caaaaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTGAATAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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