The detailed information of tRNA gene sequence


Sequence ID>WENV170693955
Genome IDLGVD01001384
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 236
End posion on genome 329
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagaacccc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGTTGAAGGAGCACGACTGGAAATCGTGTGTACTGTCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ggaatttttt
Secondary structure (Cloverleaf model)
>WENV170693955	Ser	GGA
                   c      GCCA ggaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACTGTCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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