The detailed information of tRNA gene sequence


Sequence ID>WENV170693962
Genome IDLGVD01002010
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1871
End posion on genome 1797
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tacctcttga
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGACCATCCTGCAAGGCTGGGGGTCTTGTGACCGGAGTTCAA
ATCTCCGCGGCCCCAttc
Downstream region at tRNA end position 
gttttctata
Secondary structure (Cloverleaf model)
>WENV170693962	Pro	GGG
                   a      Attc gttttctata
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C G G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        G     TGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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