The detailed information of tRNA gene sequence


Sequence ID>WENV170694019
Genome IDLGVD01004707
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1181
End posion on genome 1256
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attacaaatT
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGTCGCCTTCACACGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCATtc
Downstream region at tRNA end position 
agattgagag
Secondary structure (Cloverleaf model)
>WENV170694019	Val	CAC
                   T      ATtc agattgagag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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