The detailed information of tRNA gene sequence


Sequence ID>WENV170694037
Genome IDLGVD01007325
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 4357
End posion on genome 4444
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcagcttgc
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGATGGTGCTCGCCTGGAAAGCGGGTGTAGTGAAAGCTACC
CGGGGTTCGAATCCCCGCCTCTCCGCCA
Downstream region at tRNA end position 
ttttagagtt
Secondary structure (Cloverleaf model)
>WENV170694037	Ser	GGA
                   c      GCCA ttttagagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C A       C G G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTAGTGAAAGCTACC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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