The detailed information of tRNA gene sequence


Sequence ID>WENV170694069
Genome IDLGVD01009250
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 2993
End posion on genome 2919
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagaacgta
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGATCGTGCGTTCAAA
TCGCACCGACCCCACtt
Downstream region at tRNA end position 
aattttttgt
Secondary structure (Cloverleaf model)
>WENV170694069	Trp	CCA
                   a      ACtt aattttttgt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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