The detailed information of tRNA gene sequence


Sequence ID>WENV170694081
Genome IDLGVD01009912
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 316
End posion on genome 219
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttcataat
tRNA gene sequence 
GGAAGTGGATAGCTCACTGGTGGAGCTCCCGGACTTCAAATCCGGTGTGGGGCGTTAACA
CCGTCTCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atggtttgca
Secondary structure (Cloverleaf model)
>WENV170694081	SeC(p)	TCA
                   t      GCCA atggtttgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       | | | |                 T T
    G       A G C T
      T G G        C     TGTGGGGCGTTAACACCGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK