The detailed information of tRNA gene sequence


Sequence ID>WENV170694088
Genome IDLGVD01010500
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 248
End posion on genome 163
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaagaagcg
tRNA gene sequence 
GCCGAGGTAGCTTAGCGGACTAAAGCGCCGGCCTTGAGAGCCGGTGTCCCACAAGGGACA
CAGGGGTTCGAATCCCTTCCTCGGCGttc
Downstream region at tRNA end position 
gctcagggta
Secondary structure (Cloverleaf model)
>WENV170694088	Ser	TGA
                   g      Gttc gctcagggta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    G       T T C G       A G G G G     C
    G       | | | |                 T T
    A       A A G C
      C T A        G     TGTCCCACAAGGGACAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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