The detailed information of tRNA gene sequence


Sequence ID>WENV170694116
Genome IDLGVD01012096
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 4457
End posion on genome 4542
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtaaggttcc
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGCTTAAGGCGGCGGTCTTGAAAACCGTTGAACGAAAGTTCCGT
GGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
taaagaaata
Secondary structure (Cloverleaf model)
>WENV170694116	Ser	TGA
                   c      GCCA taaagaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGAACGAAAGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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