The detailed information of tRNA gene sequence


Sequence ID>WENV170694126
Genome IDLGVD01012925
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 387
End posion on genome 313
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggtgaaaaat
tRNA gene sequence 
GCCTCGGTAGCTTAGCTTGGTTTGAGCGGCTGATTTGTAATCAGCAGGTCGAGGGTTCAA
ATCCCTCCCGGGGCTtta
Downstream region at tRNA end position 
acccccccca
Secondary structure (Cloverleaf model)
>WENV170694126	Thr	TGT
                   t      Ttta acccccccca
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     A
  T         T T C G       G A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T T          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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