The detailed information of tRNA gene sequence


Sequence ID>WENV170694166
Genome IDLGVD01016786
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 21960
End posion on genome 22034
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgttccatcc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGGAGAGCATTCGCCTCACACGCGAAGGGTCCGGGGTTCGATCC
CCCGACCGCCCACCA
Downstream region at tRNA end position 
attattttca
Secondary structure (Cloverleaf model)
>WENV170694166	Val	CAC
                   c      ACCA attattttca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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