The detailed information of tRNA gene sequence


Sequence ID>WENV170694183
Genome IDLGVD01017865
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 475
End posion on genome 549
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaatatc
tRNA gene sequence 
AGCGGGGTAGGGTAGTTAGGAGATCCCGTCGGGCTCATAACCCGGAGATCGATGGTTCGA
ATCCATCCCCCGCTAttc
Downstream region at tRNA end position 
caacactttt
Secondary structure (Cloverleaf model)
>WENV170694183	Met	CAT
                   c      Attc caacactttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    T T G A        A      | | | | |     G
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A G A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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