The detailed information of tRNA gene sequence


Sequence ID>WENV170694198
Genome IDLGVD01019883
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 9011
End posion on genome 8935
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgtcgcccgt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCACCTGGTTTGGGACCAGGGTGTCGGAGGTTCGAA
TCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
gttcaagaca
Secondary structure (Cloverleaf model)
>WENV170694198	Pro	TGG
                   t      ACCA gttcaagaca
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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