The detailed information of tRNA gene sequence


Sequence ID>WENV170694238
Genome IDLGVD01024219
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1799
End posion on genome 1875
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aagatgatgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAAGTTCAAA
TCTTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcccccgagt
Secondary structure (Cloverleaf model)
>WENV170694238	Pro	CGG
                   t      ACCA tcccccgagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T T C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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