The detailed information of tRNA gene sequence


Sequence ID>WENV170694258
Genome IDLGVD01026210
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1444
End posion on genome 1370
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acctaaaaaT
tRNA gene sequence 
GCCCGGGTGGTGTAGCGGCCTATCATTGAGCCCTGTCGAGGCTCGGACTCGGGTTCAAAT
CCCGACCTGGGCGTga
Downstream region at tRNA end position 
attcctacta
Secondary structure (Cloverleaf model)
>WENV170694258	Asp	GTC
                   T      GTga attcctacta
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        G      | | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        T     GGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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