The detailed information of tRNA gene sequence


Sequence ID>WENV170694309
Genome IDLGVD01032809
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 430
End posion on genome 506
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaagttca
tRNA gene sequence 
GGGGCTGTAGTAGAGTTGGTTACAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tacaaccaaa
Secondary structure (Cloverleaf model)
>WENV170694309	Asp	GTC
                   a      GCCA tacaaccaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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