The detailed information of tRNA gene sequence


Sequence ID>WENV170694429
Genome IDLGVD01055252
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 88
End posion on genome 163
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatgtagcaT
tRNA gene sequence 
GGGGTCGTGGCCTAGTTTGGAAGGGCAGCGGGCTCCAGACTCGCCGATCGTGTGTTCGAA
TCGCACCGGCCCCATag
Downstream region at tRNA end position 
gtgtcacata
Secondary structure (Cloverleaf model)
>WENV170694429	Trp	CCA
                   T      ATag gtgtcacata
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | + |     G
    T       T C C G       G T G T G     C
    T       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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