The detailed information of tRNA gene sequence


Sequence ID>WENV170694505
Genome IDLGVD01074339
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 427
End posion on genome 352
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
catcggacag
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttttacattt
Secondary structure (Cloverleaf model)
>WENV170694505	Ala	GGC
                   g      ACCA ttttacattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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