The detailed information of tRNA gene sequence


Sequence ID>WENV170694523
Genome IDLGVD01079962
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 382
End posion on genome 306
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gagatcatgt
tRNA gene sequence 
CGGGGCGTGGCGCAGACTGGAAGCGCACCTGAATGGGGTTCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttctttt
Secondary structure (Cloverleaf model)
>WENV170694523	Pro	GGG
                   t      ACCA tttttctttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      A G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G A A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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