The detailed information of tRNA gene sequence


Sequence ID>WENV170694524
Genome IDLGVD01080113
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 627
End posion on genome 536
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggcataaat
tRNA gene sequence 
GGAGTAGTACTCAAGTTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTCGCGCG
GCGCGAGAGTTCGAATCTCTCCTACTCCGCCA
Downstream region at tRNA end position 
ttnntcctat
Secondary structure (Cloverleaf model)
>WENV170694524	Ser	GCT
                   t      GCCA ttnntcctat
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C T C     A
    T T G A        A      | | | | |     G
  G         A C T C       G A G A G     C
  G           | | |                 T T
  C         A G A G
    T G A          G     TAGGTCGTTCGCGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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