The detailed information of tRNA gene sequence


Sequence ID>WENV170694604
Genome IDLGVD01135902
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 426
End posion on genome 519
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttgagaac
tRNA gene sequence 
GGAAGTGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGGCTAACCCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
tattcactct
Secondary structure (Cloverleaf model)
>WENV170694604	SeC(p)	TCA
                   c      GCCA tattcactct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGGCTAACCCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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