The detailed information of tRNA gene sequence


Sequence ID>WENV170694626
Genome IDLGVD01162362
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 113
End posion on genome 39
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaacagcttt
tRNA gene sequence 
AGGTCTGTGGTGAAATGGCTATCATGACTCTCTCCAAAAGAGTTGTTCCAGGTTCGAGTC
CTGGCAGACCTGCAA
Downstream region at tRNA end position 
tttattctca
Secondary structure (Cloverleaf model)
>WENV170694626	Trp	CCA
                   t      GCAA tttattctca
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     G G T C C     A
      T A A        G      | | | | |     G
    G       A G T G       C C A G G     C
    G       | | | +                 T T
    C       T C A T
      T A          G     TGTT
                    A - T
                    C - G
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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