The detailed information of tRNA gene sequence


Sequence ID>WENV170694642
Genome IDLGVD01189578
Search identical group
Phylum/Class[LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at
Species
Start position on genome 1897
End posion on genome 1823
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggaacataa
tRNA gene sequence 
GGTCCCGTAGCCAAGTGGCTAAGGCAATGGACTGCAACTCCGTGACCAGCGGTTCGAATC
CGCTCGGGACCTCCA
Downstream region at tRNA end position 
atcttttcta
Secondary structure (Cloverleaf model)
>WENV170694642	Cys	GCA
                   a      TCCA atcttttcta
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    G       A C C G       A G C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     GACC
                    A - T
                    T + G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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