The detailed information of tRNA gene sequence


Sequence ID>WENV170694656
Genome IDLGVE01000107
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1277
End posion on genome 1200
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccactaccct
tRNA gene sequence 
GTCCCCATCGTCTAGTCTGGTCCAGGACACCGGCCTTTCACGCCGGCAGCACCGGTTCAA
ATCCGGTTGGGGACGCCA
Downstream region at tRNA end position 
cttcaagcag
Secondary structure (Cloverleaf model)
>WENV170694656	Glu	TTC
                   t      GCCA cttcaagcag
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    C T G A        C      | | | | |     A
  T         T C T G       A C C G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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