The detailed information of tRNA gene sequence


Sequence ID>WENV170694690
Genome IDLGVE01002566
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1830
End posion on genome 1755
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attacaaatT
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGTCGCCTTCACACGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCATtc
Downstream region at tRNA end position 
agattgagag
Secondary structure (Cloverleaf model)
>WENV170694690	Val	CAC
                   T      ATtc agattgagag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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