The detailed information of tRNA gene sequence


Sequence ID>WENV170694708
Genome IDLGVE01003538
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1905
End posion on genome 1980
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgtgagagtg
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAAC
CCGTTCACCTCCACCA
Downstream region at tRNA end position 
cttatagtag
Secondary structure (Cloverleaf model)
>WENV170694708	Ala	TGC
                   g      ACCA cttatagtag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C A
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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