The detailed information of tRNA gene sequence


Sequence ID>WENV170694725
Genome IDLGVE01004503
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1162
End posion on genome 1070
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggccttgcga
tRNA gene sequence 
GGAGAGGTTGCCGAGTGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTGAATAACG
GGATCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaatca
Secondary structure (Cloverleaf model)
>WENV170694725	Ser	CGA
                   a      GCCA caaaaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTGAATAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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