The detailed information of tRNA gene sequence


Sequence ID>WENV170694739
Genome IDLGVE01005321
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 239
End posion on genome 162
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gtgttacaaG
tRNA gene sequence 
GCCCACGTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTTCACCGGTTCGAT
CCCGGTCGTGGGCTTCA
Downstream region at tRNA end position 
gtttttgaga
Secondary structure (Cloverleaf model)
>WENV170694739	Thr	GGT
                   G      TTCA gtttttgaga
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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