The detailed information of tRNA gene sequence


Sequence ID>WENV170694812
Genome IDLGVE01010153
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 576
End posion on genome 661
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagaaagacc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGAGCGAAAGCTCCGT
GGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ggttatactg
Secondary structure (Cloverleaf model)
>WENV170694812	Ser	TGA
                   c      GCCA ggttatactg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGCGAAAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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