The detailed information of tRNA gene sequence


Sequence ID>WENV170694827
Genome IDLGVE01011375
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2313
End posion on genome 2388
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcaacagtac
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGCTAAGGCAGTGGTCTGCAAAACCATTATTCATCGGTTCGACT
CCGATCGCCGCCTCCA
Downstream region at tRNA end position 
tgaatttcaa
Secondary structure (Cloverleaf model)
>WENV170694827	Cys	GCA
                   c      TCCA tgaatttcaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C G       A T C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     TATTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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