The detailed information of tRNA gene sequence


Sequence ID>WENV170694885
Genome IDLGVE01017572
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 966
End posion on genome 879
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtgtgaggT
tRNA gene sequence 
GCCAGGGTGGCAGAGCGGACAAATGCGGTGGCCTCGAGAGCCATTGTCCCGTAAGGGGCG
CTCAGGTTCAAATCCTGACCCTGGCGAtc
Downstream region at tRNA end position 
tctgcgtggt
Secondary structure (Cloverleaf model)
>WENV170694885	Ser	CGA
                   T      GAtc tctgcgtggt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      C G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCGTAAGGGGCGC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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