The detailed information of tRNA gene sequence


Sequence ID>WENV170694917
Genome IDLGVE01021075
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 213
End posion on genome 123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cactccacat
tRNA gene sequence 
GGACAGTTGGGTGAGTTGGCTGAAACCACACCCCTGCTAAGGGTGCATATCCTAACGGGT
ATCGAGAGTTCGAATCTCTCACTGTCCGCCA
Downstream region at tRNA end position 
tacttttaaa
Secondary structure (Cloverleaf model)
>WENV170694917	Ser	GCT
                   t      GCCA tacttttaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G A G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CATATCCTAACGGGTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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