The detailed information of tRNA gene sequence


Sequence ID>WENV170694918
Genome IDLGVE01021404
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 330
End posion on genome 254
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gagatcatgt
tRNA gene sequence 
CGGGGCGTGGCGCAGACTGGAAGCGCACCTGAATGGGGTTCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttctttt
Secondary structure (Cloverleaf model)
>WENV170694918	Pro	GGG
                   t      ACCA tttttctttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      A G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G A A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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