The detailed information of tRNA gene sequence


Sequence ID>WENV170694970
Genome IDLGVE01027641
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 3752
End posion on genome 3664
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggaaataa
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCTAAGGGGCACGCCTGGAAAGCGTGTAAGACCGTAAGGTCC
CGCGGGTTCAAGTCCCGCTCTCTCTGCCA
Downstream region at tRNA end position 
tattaaattg
Secondary structure (Cloverleaf model)
>WENV170694970	Ser	GGA
                   a      GCCA tattaaattg
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     A
    T       G C C T       G C G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TAAGACCGTAAGGTCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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