The detailed information of tRNA gene sequence


Sequence ID>WENV170694985
Genome IDLGVE01029233
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 148
End posion on genome 223
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcgtttcttt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCGGGAGTTCGATC
CTCCCTGGCTCCACCA
Downstream region at tRNA end position 
atttcaatgt
Secondary structure (Cloverleaf model)
>WENV170694985	Ala	TGC
                   t      ACCA atttcaatgt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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