The detailed information of tRNA gene sequence


Sequence ID>WENV170695029
Genome IDLGVE01034951
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 4464
End posion on genome 4367
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcgtaaaaac
tRNA gene sequence 
GGAAGTGCGCAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
actgacnnnn
Secondary structure (Cloverleaf model)
>WENV170695029	SeC(p)	TCA
                   c      GCCA actgacnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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