The detailed information of tRNA gene sequence


Sequence ID>WENV170695039
Genome IDLGVE01037065
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1114
End posion on genome 1040
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aaaagaaata
tRNA gene sequence 
GCTCCGCTGGTGTAGTTCGGCCAAGCATGCGGGCCTCTCGAGCCCACGACCGGGGTTCAA
ATCCCCGGCGGAGCAtcg
Downstream region at tRNA end position 
ttttattttc
Secondary structure (Cloverleaf model)
>WENV170695039	Glu	CTC
                   a      Atcg ttttattttc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     G C C C C     A
    T T G A        G      | | | | |     A
  C         T G T G       C G G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        G     CGAC
                    C   A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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