The detailed information of tRNA gene sequence


Sequence ID>WENV170695069
Genome IDLGVE01040396
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 168
End posion on genome 241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaatagaaa
tRNA gene sequence 
GCCGGGGTGGCCTAGTGGGTTAGGGCGCCAGACTCATAATCTGGAAGTCGCGGGTTCGAG
CCCCGCTCCCGGCAtgg
Downstream region at tRNA end position 
atatgcttat
Secondary structure (Cloverleaf model)
>WENV170695069	Met	CAT
                   a      Atgg atatgcttat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      T T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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