The detailed information of tRNA gene sequence


Sequence ID>WENV170695135
Genome IDLGVE01050661
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 673
End posion on genome 600
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaatagaaa
tRNA gene sequence 
GCCGGGGTGGCCTAGTGGGTTAGGGCGCCAGACTCATAATCTGGAAGTCGCGGGTTCGAG
CCCCGCTCCCGGCAtgg
Downstream region at tRNA end position 
atatgtttat
Secondary structure (Cloverleaf model)
>WENV170695135	Met	CAT
                   a      Atgg atatgtttat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      T T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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