The detailed information of tRNA gene sequence


Sequence ID>WENV170695256
Genome IDLGVE01066384
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 505
End posion on genome 418
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaattga
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGACGGTCTTGAAAACCGTTGAGTGTCACAGCTCC
GTGGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
gatgatagat
Secondary structure (Cloverleaf model)
>WENV170695256	Ser	TGA
                   a      GCCA gatgatagat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGTGTCACAGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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