The detailed information of tRNA gene sequence


Sequence ID>WENV170695264
Genome IDLGVE01067223
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 306
End posion on genome 382
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttttgtgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGTAGAGCATCGGACTCCAAATCCGAGGGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gttaagtgtt
Secondary structure (Cloverleaf model)
>WENV170695264	Trp	CCA
                   c      GCCA gttaagtgtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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