The detailed information of tRNA gene sequence


Sequence ID>WENV170695275
Genome IDLGVE01069386
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 282
End posion on genome 374
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aggatttaca
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTCAAAAACG
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtaaagagac
Secondary structure (Cloverleaf model)
>WENV170695275	Ser	CGA
                   a      GCCA gtaaagagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATCCTGTCAAAAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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