The detailed information of tRNA gene sequence


Sequence ID>WENV170695303
Genome IDLGVE01073411
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 73
End posion on genome 165
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taagcaattt
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTGGGGTGAAAACT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atttcataaa
Secondary structure (Cloverleaf model)
>WENV170695303	Ser	GCT
                   t      GCCA atttcataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGTGAAAACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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