The detailed information of tRNA gene sequence


Sequence ID>WENV170695323
Genome IDLGVE01076081
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1391
End posion on genome 1482
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtggagtta
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTAGACTC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
caaagataaa
Secondary structure (Cloverleaf model)
>WENV170695323	Ser	GCT
                   a      GCCA caaagataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGGGGGTTAGACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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