The detailed information of tRNA gene sequence


Sequence ID>WENV170695356
Genome IDLGVE01081970
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1478
End posion on genome 1405
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taataacact
tRNA gene sequence 
GCCTCGGTAGCTTAGCCTGGATGAGCGATTGACTTGTAATCAGTAGGTCGAGGGTTCAAA
TCCCTCCCGAGGCTttc
Downstream region at tRNA end position 
tttgtacgtc
Secondary structure (Cloverleaf model)
>WENV170695356	Thr	TGT
                   t      Tttc tttgtacgtc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       T T C G       G A G G G     C
    T       + | | |                 T T
    G       G A G C
      G A T        G     AGGTC
                    A - T
                    T + G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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