The detailed information of tRNA gene sequence


Sequence ID>WENV170695394
Genome IDLGVE01086448
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 335328
End posion on genome 335418
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctaatttac
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGCTGAAGGGACTGGTCTTGAAAACCAGCAGGCGAGTAATCG
CGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttatcatttt
Secondary structure (Cloverleaf model)
>WENV170695394	Ser	TGA
                   c      GCCA ttatcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGAGTAATCGCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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