The detailed information of tRNA gene sequence


Sequence ID>WENV170695426
Genome IDLGVE01090819
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1640
End posion on genome 1567
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaagaagcg
tRNA gene sequence 
GGGGCAGTAGGGTAGCCAGGTTATCCTCGTGGCTTTGGGAGCCATGGACCCCAGTTCAAA
TCTGGGCTGCCCCAtaa
Downstream region at tRNA end position 
atcttttctc
Secondary structure (Cloverleaf model)
>WENV170695426	Pro	TGG
                   g      Ataa atcttttctc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G G G T C     A
    C C G A        A      | | | | |     A
  A         T G G G       C C C A G     C
  G           | | +                 T T
  G         T C C T
    T T A          C     GGAC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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