The detailed information of tRNA gene sequence


Sequence ID>WENV170695439
Genome IDLGVE01094585
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1098
End posion on genome 1174
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aagatgatgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAAGTTCAAA
TCTTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcccccgagt
Secondary structure (Cloverleaf model)
>WENV170695439	Pro	CGG
                   t      ACCA tcccccgagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T T C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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