The detailed information of tRNA gene sequence


Sequence ID>WENV170695461
Genome IDLGVE01097978
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 305
End posion on genome 227
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaacatgaa
tRNA gene sequence 
GGGGCCGTAGTGCAGCTTGGTTTAACACGCCTGCCTGTCACGCAGGAGATCGCGAGTTCA
AATCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170695461	Asp	GTC
                   a      GCCA ttttnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C T C     A
    T C G A        A      + | | | |     A
  T         C G T G       G C G A G     C
  G           | | |                 T T
  G         A C A C
    T T T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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